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Genome Details

Selected Rep_genome_ID: ChuDM_2017_SRR8942418_bin.17
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Gammaproteobacteria
→
Order
Burkholderiales
→
Family
Burkholderiaceae_A
→
Genus
Aphodousia
→
Species
Aphodousia secunda_B
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG018_maxbin.017 1,946,586 98.02% 1.25% NA Africa H3AfricaPhase2
C38.bin_31 2,057,168 98.02% 1.88% China(Inner Mongolia) Asia IMGG
CGMR005611 1,720,083 96.77% 0.62% China Asia CGMR
ChuDM_2017_SRR8942418_bin.17 1,768,722 98.02% 0.625% US North America ELGG
HRGMv2_0589 1,814,053 96.14% 0.625% Japan Asia HRGM
MGYG000000567 1,906,485 98.02% 1.25% China Asia UHGG
Rep_669 2,017,870 95% 0.625% NA NA WIS
SPMP95_bin.35 1,867,313 96.46% 1.25% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ChuDM_2017_SRR8942418_bin.17_CGC6 CGCFAM_00134 Yes 4 1
ChuDM_2017_SRR8942418_bin.17_CGC4 CGCFAM_00291 Yes 4 1
ChuDM_2017_SRR8942418_bin.17_CGC1 CGCFAM_00685 Yes 4 1
ChuDM_2017_SRR8942418_bin.17_CGC2 CGCFAM_03651 Yes 3 1
Top CAZyme Families