Cluster: ChuDM_2017_SRR8942418_bin.17_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942418_bin.17
- CGC Family ID: CGCFAM_00291
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942418_bin.17_k119_21999 | ChuDM_2017_SRR8942418_bin.17_k119_21999_104 | 111750 | 114527 | - | 3.A.5.1.1 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942418_bin.17_k119_21999 | ChuDM_2017_SRR8942418_bin.17_k119_21999_105 | 114758 | 115216 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ChuDM_2017_SRR8942418_bin.17_k119_21999 | ChuDM_2017_SRR8942418_bin.17_k119_21999_106 | 115217 | 115867 | - | 2.A.76.1.1 |
| CAZyme | ChuDM_2017_SRR8942418_bin.17_k119_21999 | ChuDM_2017_SRR8942418_bin.17_k119_21999_107 | 115979 | 116890 | - | CE11 |
Gene ID: ChuDM_2017_SRR8942418_bin.17_k119_21999_104
Type: TC
Location: 111750 - 114527 (-)
Type: TC
Location: 111750 - 114527 (-)
Gene ID: ChuDM_2017_SRR8942418_bin.17_k119_21999_105
Type:
Location: 114758 - 115216 (+)
Type:
Location: 114758 - 115216 (+)
Gene ID: ChuDM_2017_SRR8942418_bin.17_k119_21999_106
Type: TC
Location: 115217 - 115867 (-)
Type: TC
Location: 115217 - 115867 (-)
Gene ID: ChuDM_2017_SRR8942418_bin.17_k119_21999_107
Type: CAZyme
Location: 115979 - 116890 (-)
Type: CAZyme
Location: 115979 - 116890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Aphodousia
Species
Aphodousia faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.