Genome Details
Selected Rep_genome_ID: CGMR078442
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
UPXZ01
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR078442 | 2,576,331 | 91.4% | 1.34% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR078442_CGC17 | CGCFAM_00028 | Yes | 5 | 3 | |
| CGMR078442_CGC32 | CGCFAM_00062 | Yes | 8 | 3 | beta-glucan |
| CGMR078442_CGC6 | CGCFAM_00138 | Yes | 7 | 3 | |
| CGMR078442_CGC27 | CGCFAM_00358 | Yes | 3 | 2 | |
| CGMR078442_CGC30 | CGCFAM_00444 | Yes | 4 | 1 | |
| CGMR078442_CGC18 | CGCFAM_00531 | Yes | 8 | 1 | |
| CGMR078442_CGC24 | CGCFAM_00551 | Yes | 3 | 1 | |
| CGMR078442_CGC13 | CGCFAM_00589 | Yes | 4 | 1 | |
| CGMR078442_CGC31 | CGCFAM_00822 | Yes | 4 | 2 | host glycan |
| CGMR078442_CGC29 | CGCFAM_01379 | Yes | 3 | 1 | |
| CGMR078442_CGC36 | CGCFAM_02837 | Yes | 3 | 1 | |
| CGMR078442_CGC11 | CGCFAM_03830 | Yes | 3 | 1 | |
| CGMR078442_CGC20 | CGCFAM_08836 | Yes | 11 | 2 | |
| CGMR078442_CGC38 | CGCFAM_08838 | Yes | 4 | 1 |
Top CAZyme Families