Cluster: CGMR078442_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078442
- CGC Family ID: CGCFAM_00531
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_387670 | k141_387670_10 | 9963 | 10931 | + | 1.A.34.1.3 |
| pfam | k141_387670 | k141_387670_11 | 10947 | 11783 | + | Asp_Glu_race |
| CAZyme | k141_387670 | k141_387670_12 | 11802 | 12893 | + | GT2 | GT2 |
| NULL(UNKNOWN) | k141_387670 | k141_387670_13 | 12911 | 13378 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_387670 | k141_387670_14 | 13547 | 14548 | + | PorP_SprF |
| TC | k141_387670 | k141_387670_15 | 14641 | 16008 | + | 9.A.25.1.1 |
| pfam | k141_387670 | k141_387670_16 | 16060 | 17238 | + | GldL_N |
| TC | k141_387670 | k141_387670_17 | 17326 | 18852 | + | 9.A.25.1.1 |
Gene ID: k141_387670_10
Type: TC
Location: 9963 - 10931 (+)
Type: TC
Location: 9963 - 10931 (+)
Gene ID: k141_387670_11
Type: pfam
Location: 10947 - 11783 (+)
Type: pfam
Location: 10947 - 11783 (+)
Gene ID: k141_387670_12
Type: CAZyme
Location: 11802 - 12893 (+)
Type: CAZyme
Location: 11802 - 12893 (+)
Gene ID: k141_387670_13
Type:
Location: 12911 - 13378 (-)
Type:
Location: 12911 - 13378 (-)
Gene ID: k141_387670_14
Type: pfam
Location: 13547 - 14548 (+)
Type: pfam
Location: 13547 - 14548 (+)
Gene ID: k141_387670_15
Type: TC
Location: 14641 - 16008 (+)
Type: TC
Location: 14641 - 16008 (+)
Gene ID: k141_387670_16
Type: pfam
Location: 16060 - 17238 (+)
Type: pfam
Location: 16060 - 17238 (+)
Gene ID: k141_387670_17
Type: TC
Location: 17326 - 18852 (+)
Type: TC
Location: 17326 - 18852 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
UPXZ01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.