Genome Details
Selected Rep_genome_ID: CGMR050819
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella phocaeensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR050819 | 2,489,317 | 91.83% | 1.63% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR050819_CGC1 | CGCFAM_00001 | Yes | 9 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR050819_CGC18 | CGCFAM_00003 | Yes | 5 | 2 | |
| CGMR050819_CGC26 | CGCFAM_00017 | Yes | 4 | 1 | fructan |
| CGMR050819_CGC11 | CGCFAM_00023 | Yes | 4 | 1 | |
| CGMR050819_CGC20 | CGCFAM_00030 | Yes | 3 | 1 | |
| CGMR050819_CGC29 | CGCFAM_00034 | Yes | 5 | 2 | |
| CGMR050819_CGC21 | CGCFAM_00079 | Yes | 4 | 1 | pectin |
| CGMR050819_CGC6 | CGCFAM_00254 | Yes | 5 | 1 | |
| CGMR050819_CGC23 | CGCFAM_00326 | Yes | 4 | 1 | |
| CGMR050819_CGC15 | CGCFAM_00795 | Yes | 3 | 1 | |
| CGMR050819_CGC12 | CGCFAM_01780 | Yes | 7 | 1 | |
| CGMR050819_CGC4 | CGCFAM_01841 | Yes | 4 | 1 | |
| CGMR050819_CGC17 | CGCFAM_02213 | Yes | 4 | 1 | |
| CGMR050819_CGC35 | CGCFAM_02952 | Yes | 6 | 1 | |
| CGMR050819_CGC36 | CGCFAM_05614 | Yes | 6 | 1 | |
| CGMR050819_CGC14 | CGCFAM_06930 | Yes | 5 | 1 | |
| CGMR050819_CGC16 | CGCFAM_08047 | Yes | 12 | 3 | |
| CGMR050819_CGC34 | CGCFAM_08662 | Yes | 3 | 1 |
Top CAZyme Families