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Cluster: CGMR050819_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_109330 k141_109330_1 20 1123 - GH163
CAZyme k141_109330 k141_109330_2 1171 2985 - GH29
pfam k141_109330 k141_109330_3 3655 6228 + MutS_V | Smr | MSSS
NULL(UNKNOWN) k141_109330 k141_109330_4 6488 9304 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_109330 k141_109330_5 9725 12742 + 1.B.14.6.1
pfam k141_109330 k141_109330_6 12763 14214 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_109330 k141_109330_7 14207 14353 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_109330 k141_109330_8 14350 15732 + GH144
CAZyme k141_109330 k141_109330_9 15760 18045 + GH3
Gene ID: k141_109330_1
Type: CAZyme
Location: 20 - 1123 (-)
Gene ID: k141_109330_2
Type: CAZyme
Location: 1171 - 2985 (-)
Gene ID: k141_109330_3
Type: pfam
Location: 3655 - 6228 (+)
Gene ID: k141_109330_4
Type:
Location: 6488 - 9304 (-)
Gene ID: k141_109330_5
Type: TC
Location: 9725 - 12742 (+)
Gene ID: k141_109330_6
Type: pfam
Location: 12763 - 14214 (+)
Gene ID: k141_109330_7
Type:
Location: 14207 - 14353 (+)
Gene ID: k141_109330_8
Type: CAZyme
Location: 14350 - 15732 (+)
Gene ID: k141_109330_9
Type: CAZyme
Location: 15760 - 18045 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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