Genome Details
Selected Rep_genome_ID: CGMR033869
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp001917175
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A124.CMAG_1 | 2,058,572 | 97.85% | 0% | China(Inner Mongolia) | Asia | IMGG |
| AG260_maxbin.005_sub | 1,985,278 | 97.85% | 0% | NA | Africa | H3AfricaPhase2 |
| BackhedF_2015_ERR525703_bin.21 | 1,854,844 | 97.24% | 0.097% | Sweden | Europe | ELGG |
| CGMR033869 | 1,776,231 | 98.92% | 0% | China | Asia | CGMR |
| GCA_021636945.1_ASM2163694v1_genomic | 1,865,856 | 97.85% | 4.3% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_3312 | 1,869,868 | 97.84% | 0% | Japan | Asia | HRGM |
| MGYG000002021 | 1,950,064 | 97.85% | 0% | Spain | Europe | UHGG |
| Rep_787 | 2,209,433 | 97.491% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR033869_CGC7 | CGCFAM_00029 | Yes | 3 | 1 | |
| CGMR033869_CGC10 | CGCFAM_00075 | Yes | 4 | 1 | |
| CGMR033869_CGC9 | CGCFAM_00407 | Yes | 6 | 1 | |
| CGMR033869_CGC4 | CGCFAM_00570 | Yes | 3 | 1 | |
| CGMR033869_CGC5 | CGCFAM_01714 | Yes | 3 | 1 | |
| CGMR033869_CGC13 | CGCFAM_02201 | Yes | 5 | 1 | |
| CGMR033869_CGC6 | CGCFAM_05513 | Yes | 4 | 1 | |
| CGMR033869_CGC3 | CGCFAM_08494 | Yes | 6 | 3 |
Top CAZyme Families