Cluster: CGMR033869_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR033869
- CGC Family ID: CGCFAM_08494
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_37645 | k141_37645_2 | 385 | 1566 | + | 2.A.1.7.17 |
| NULL(UNKNOWN) | k141_37645 | k141_37645_3 | 1550 | 1885 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_37645 | k141_37645_4 | 1899 | 2165 | - | 2.A.123.2.2 |
| CAZyme | k141_37645 | k141_37645_5 | 2517 | 3584 | - | GT2 |
| CAZyme | k141_37645 | k141_37645_6 | 3659 | 4735 | - | GT8 |
| CAZyme | k141_37645 | k141_37645_7 | 4729 | 6732 | - | GT111 | GT8 |
Gene ID: k141_37645_2
Type: TC
Location: 385 - 1566 (+)
Type: TC
Location: 385 - 1566 (+)
Gene ID: k141_37645_3
Type:
Location: 1550 - 1885 (+)
Type:
Location: 1550 - 1885 (+)
Gene ID: k141_37645_4
Type: TC
Location: 1899 - 2165 (-)
Type: TC
Location: 1899 - 2165 (-)
Gene ID: k141_37645_5
Type: CAZyme
Location: 2517 - 3584 (-)
Type: CAZyme
Location: 2517 - 3584 (-)
Gene ID: k141_37645_6
Type: CAZyme
Location: 3659 - 4735 (-)
Type: CAZyme
Location: 3659 - 4735 (-)
Gene ID: k141_37645_7
Type: CAZyme
Location: 4729 - 6732 (-)
Type: CAZyme
Location: 4729 - 6732 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp001917175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.