Genome Details
Selected Rep_genome_ID: C36.CMAG_2
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella parvula_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C36.CMAG_2 | 2,145,938 | 100% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR046727 | 2,034,512 | 100% | 0% | China | Asia | CGMR |
| CGMR058496 | 1,952,209 | 100% | 0% | China | Asia | CGMR |
| Rep_1892 | 2,112,899 | 100% | 0% | NA | NA | WIS |
| SW101_14 | 2,119,628 | 100% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C36.CMAG_2_CGC4 | CGCFAM_00002 | Yes | 6 | 2 | |
| C36.CMAG_2_CGC9 | CGCFAM_00394 | Yes | 27 | 1 | |
| C36.CMAG_2_CGC11 | CGCFAM_01053 | Yes | 4 | 1 | |
| C36.CMAG_2_CGC5 | CGCFAM_01595 | Yes | 5 | 1 | |
| C36.CMAG_2_CGC7 | CGCFAM_03168 | Yes | 8 | 1 | |
| C36.CMAG_2_CGC12 | CGCFAM_03652 | Yes | 5 | 1 | |
| C36.CMAG_2_CGC3 | CGCFAM_04504 | Yes | 6 | 2 | |
| C36.CMAG_2_CGC6 | CGCFAM_07962 | Yes | 12 | 1 |
Top CAZyme Families