Cluster: C36.CMAG_2_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: C36.CMAG_2
- CGC Family ID: CGCFAM_07962
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C36_contig_3796 | C36_contig_3796_733 | 891348 | 891959 | + | 1.A.30.2.9 |
| pfam | C36_contig_3796 | C36_contig_3796_734 | 891956 | 892360 | + | ExbD |
| pfam | C36_contig_3796 | C36_contig_3796_735 | 892369 | 893172 | + | TonB_C |
| TC | C36_contig_3796 | C36_contig_3796_736 | 893339 | 895402 | + | 1.B.14.1.4 |
| STP | C36_contig_3796 | C36_contig_3796_737 | 895526 | 896509 | + | Peripla_BP_2 |
| TC | C36_contig_3796 | C36_contig_3796_738 | 896493 | 897494 | + | 3.A.1.14.10 |
| TC | C36_contig_3796 | C36_contig_3796_739 | 897491 | 898279 | + | 3.A.1.14.7 |
| TC | C36_contig_3796 | C36_contig_3796_740 | 898532 | 899119 | + | 9.B.27.2.5 |
| CAZyme | C36_contig_3796 | C36_contig_3796_741 | 899131 | 900762 | + | GT83 |
| STP | C36_contig_3796 | C36_contig_3796_742 | 901085 | 902038 | + | SBP_bac_3 |
| TC | C36_contig_3796 | C36_contig_3796_743 | 902049 | 902801 | + | 3.A.1.17.1 |
| TC | C36_contig_3796 | C36_contig_3796_744 | 902813 | 903586 | + | 3.A.1.16.3 |
Gene ID: C36_contig_3796_733
Type: TC
Location: 891348 - 891959 (+)
Type: TC
Location: 891348 - 891959 (+)
Gene ID: C36_contig_3796_734
Type: pfam
Location: 891956 - 892360 (+)
Type: pfam
Location: 891956 - 892360 (+)
Gene ID: C36_contig_3796_735
Type: pfam
Location: 892369 - 893172 (+)
Type: pfam
Location: 892369 - 893172 (+)
Gene ID: C36_contig_3796_736
Type: TC
Location: 893339 - 895402 (+)
Type: TC
Location: 893339 - 895402 (+)
Gene ID: C36_contig_3796_737
Type: STP
Location: 895526 - 896509 (+)
Type: STP
Location: 895526 - 896509 (+)
Gene ID: C36_contig_3796_738
Type: TC
Location: 896493 - 897494 (+)
Type: TC
Location: 896493 - 897494 (+)
Gene ID: C36_contig_3796_739
Type: TC
Location: 897491 - 898279 (+)
Type: TC
Location: 897491 - 898279 (+)
Gene ID: C36_contig_3796_740
Type: TC
Location: 898532 - 899119 (+)
Type: TC
Location: 898532 - 899119 (+)
Gene ID: C36_contig_3796_741
Type: CAZyme
Location: 899131 - 900762 (+)
Type: CAZyme
Location: 899131 - 900762 (+)
Gene ID: C36_contig_3796_742
Type: STP
Location: 901085 - 902038 (+)
Type: STP
Location: 901085 - 902038 (+)
Gene ID: C36_contig_3796_743
Type: TC
Location: 902049 - 902801 (+)
Type: TC
Location: 902049 - 902801 (+)
Gene ID: C36_contig_3796_744
Type: TC
Location: 902813 - 903586 (+)
Type: TC
Location: 902813 - 903586 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella parvula_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.