Genome Details
Selected Rep_genome_ID: AG527_2
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp900541575
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG527_2 | 2,629,796 | 97.58% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR100698 | 2,665,583 | 95.35% | 0.87% | China | Asia | CGMR |
| GCA_021625945.1_ASM2162594v1_genomic | 2,422,254 | 97.21% | 0.39% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0264 | 2,575,727 | 97.58% | 0% | China | Asia | HRGM |
| Rep_125 | 2,523,391 | 96.2825% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG527_2_CGC1 | CGCFAM_00381 | Yes | 3 | 1 | |
| AG527_2_CGC16 | CGCFAM_00387 | Yes | 3 | 1 | |
| AG527_2_CGC20 | CGCFAM_00798 | Yes | 4 | 1 | |
| AG527_2_CGC17 | CGCFAM_00949 | Yes | 4 | 1 | |
| AG527_2_CGC27 | CGCFAM_01679 | Yes | 3 | 1 | |
| AG527_2_CGC13 | CGCFAM_04854 | Yes | 3 | 1 | |
| AG527_2_CGC24 | CGCFAM_04855 | Yes | 11 | 4 | |
| AG527_2_CGC2 | CGCFAM_07289 | Yes | 5 | 1 | |
| AG527_2_CGC21 | CGCFAM_07366 | Yes | 9 | 1 | |
| AG527_2_CGC5 | CGCFAM_07367 | Yes | 5 | 2 |
Top CAZyme Families