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Cluster: AG527_2_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189553 k141_189553_43 51506 52132 - 9.B.18.1.3
CAZyme k141_189553 k141_189553_44 52212 53348 - GT4
CAZyme k141_189553 k141_189553_45 53407 54507 - GT4
CAZyme k141_189553 k141_189553_46 54504 55370 - GT2
CAZyme k141_189553 k141_189553_47 55367 56278 - GT2
NULL(UNKNOWN) k141_189553 k141_189553_48 56286 57473 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_189553 k141_189553_49 57464 58732 - 2.A.66.2.1
NULL(UNKNOWN) k141_189553 k141_189553_50 58835 59905 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_189553 k141_189553_51 59962 61059 - 9.B.146.1.4
pfam k141_189553 k141_189553_52 61090 63618 - Poly_export | SLBB | SLBB | SLBB | SLBB | SLBB | SLBB | SLBB_2 | SLBB_2 | SLBB_2
TC k141_189553 k141_189553_53 64922 67444 + 3.A.9.1.2
Gene ID: k141_189553_43
Type: TC
Location: 51506 - 52132 (-)
Gene ID: k141_189553_44
Type: CAZyme
Location: 52212 - 53348 (-)
Gene ID: k141_189553_45
Type: CAZyme
Location: 53407 - 54507 (-)
Gene ID: k141_189553_46
Type: CAZyme
Location: 54504 - 55370 (-)
Gene ID: k141_189553_47
Type: CAZyme
Location: 55367 - 56278 (-)
Gene ID: k141_189553_48
Type:
Location: 56286 - 57473 (-)
Gene ID: k141_189553_49
Type: TC
Location: 57464 - 58732 (-)
Gene ID: k141_189553_50
Type:
Location: 58835 - 59905 (-)
Gene ID: k141_189553_51
Type: TC
Location: 59962 - 61059 (-)
Gene ID: k141_189553_52
Type: pfam
Location: 61090 - 63618 (-)
Gene ID: k141_189553_53
Type: TC
Location: 64922 - 67444 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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