Genome Details
Selected Rep_genome_ID: AG349_bin.17
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934539585
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG349_bin.17 | 2,998,893 | 98.66% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR049777 | 2,848,050 | 95.86% | 0.79% | China | Asia | CGMR |
| HRGMv2_2945 | 2,837,060 | 96.64% | 0% | United Kingdom | Europe | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_F_7_RAU0027AZ.367 | 2,798,867 | 92.26% | 0.45% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG349_bin.17_CGC38 | CGCFAM_01587 | Yes | 4 | 1 | |
| AG349_bin.17_CGC2 | CGCFAM_01867 | Yes | 3 | 1 | |
| AG349_bin.17_CGC37 | CGCFAM_01893 | Yes | 3 | 1 | |
| AG349_bin.17_CGC3 | CGCFAM_02520 | Yes | 6 | 1 | |
| AG349_bin.17_CGC27 | CGCFAM_03267 | Yes | 7 | 2 | |
| AG349_bin.17_CGC26 | CGCFAM_03272 | Yes | 7 | 2 | |
| AG349_bin.17_CGC30 | CGCFAM_04423 | Yes | 3 | 2 | |
| AG349_bin.17_CGC14 | CGCFAM_04689 | Yes | 10 | 3 | |
| AG349_bin.17_CGC7 | CGCFAM_04693 | Yes | 5 | 1 | |
| AG349_bin.17_CGC11 | CGCFAM_07146 | Yes | 4 | 1 | |
| AG349_bin.17_CGC41 | CGCFAM_07149 | Yes | 6 | 1 | |
| AG349_bin.17_CGC28 | CGCFAM_07150 | Yes | 6 | 1 |
Top CAZyme Families