Cluster: AG349_bin.17_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: AG349_bin.17
- CGC Family ID: CGCFAM_02520
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_342589 | k141_342589_10 | 11091 | 12053 | + | 3.A.1.1.10 |
| TC | k141_342589 | k141_342589_11 | 12070 | 12960 | + | 3.A.1.1.10 |
| pfam | k141_342589 | k141_342589_12 | 13030 | 14706 | + | SBP_bac_8 |
| TC | k141_342589 | k141_342589_13 | 14832 | 16619 | + | 8.A.59.2.1 |
| TF | k141_342589 | k141_342589_14 | 16632 | 18041 | + | HTH_AraC |
| CAZyme | k141_342589 | k141_342589_15 | 18150 | 20039 | + | GH20 |
Gene ID: k141_342589_10
Type: TC
Location: 11091 - 12053 (+)
Type: TC
Location: 11091 - 12053 (+)
Gene ID: k141_342589_11
Type: TC
Location: 12070 - 12960 (+)
Type: TC
Location: 12070 - 12960 (+)
Gene ID: k141_342589_12
Type: pfam
Location: 13030 - 14706 (+)
Type: pfam
Location: 13030 - 14706 (+)
Gene ID: k141_342589_13
Type: TC
Location: 14832 - 16619 (+)
Type: TC
Location: 14832 - 16619 (+)
Gene ID: k141_342589_14
Type: TF
Location: 16632 - 18041 (+)
Type: TF
Location: 16632 - 18041 (+)
Gene ID: k141_342589_15
Type: CAZyme
Location: 18150 - 20039 (+)
Type: CAZyme
Location: 18150 - 20039 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934539585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_342589_12 | vegetarian > vegan | 1.07931 | 0.00578 |
| k141_342589_15 | vegetarian > vegan | 1.56551 | 0.00578 |