Genome Details
Selected Rep_genome_ID: AG078_28
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG078_28 | 2,318,569 | 96.26% | 4.57% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG078_28_CGC11 | CGCFAM_00018 | Yes | 7 | 3 | |
| AG078_28_CGC8 | CGCFAM_00099 | Yes | 4 | 1 | |
| AG078_28_CGC16 | CGCFAM_00182 | Yes | 5 | 1 | |
| AG078_28_CGC3 | CGCFAM_00289 | Yes | 3 | 1 | |
| AG078_28_CGC1 | CGCFAM_00467 | Yes | 4 | 1 | |
| AG078_28_CGC14 | CGCFAM_00772 | Yes | 5 | 1 |
Top CAZyme Families