Cluster: VatanenT_2016_SRR4408211_bin.5_CGC2
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: VatanenT_2016_SRR4408211_bin.5
- CGC Family ID: CGCFAM_00302
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_2 | 662 | 1510 | - | GH31_3 |
| NULL(UNKNOWN) | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_3 | 1844 | 2743 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_4 | 3035 | 3343 | - | 3.D.6.1.3 |
| NULL(UNKNOWN) | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_5 | 3340 | 3513 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_6 | 3515 | 4087 | - | 3.D.6.1.2 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_7 | 4091 | 4741 | - | 3.D.6.1.2 |
| pfam | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_8 | 4757 | 5248 | - | FMN_bind |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_9 | 5261 | 7105 | - | 3.D.5.1.1 |
| TC | VatanenT_2016_SRR4408211_bin.5_k119_6778 | VatanenT_2016_SRR4408211_bin.5_k119_6778_10 | 7119 | 8423 | - | 3.D.6.1.2 |
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_2
Type: CAZyme
Location: 662 - 1510 (-)
Type: CAZyme
Location: 662 - 1510 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_3
Type:
Location: 1844 - 2743 (-)
Type:
Location: 1844 - 2743 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_4
Type: TC
Location: 3035 - 3343 (-)
Type: TC
Location: 3035 - 3343 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_5
Type:
Location: 3340 - 3513 (-)
Type:
Location: 3340 - 3513 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_6
Type: TC
Location: 3515 - 4087 (-)
Type: TC
Location: 3515 - 4087 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_7
Type: TC
Location: 4091 - 4741 (-)
Type: TC
Location: 4091 - 4741 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_8
Type: pfam
Location: 4757 - 5248 (-)
Type: pfam
Location: 4757 - 5248 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_9
Type: TC
Location: 5261 - 7105 (-)
Type: TC
Location: 5261 - 7105 (-)
Gene ID: VatanenT_2016_SRR4408211_bin.5_k119_6778_10
Type: TC
Location: 7119 - 8423 (-)
Type: TC
Location: 7119 - 8423 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp018365815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.