PROTEIN: VatanenT_2016_SRR4408211_bin.5_k119_6778_3
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Protein File & Metadata
Source:
VatanenT_2016_SRR4408211_bin.5_k119_6778_3.pdb
Genome ID:
Protein ID:
VatanenT_2016_SRR4408211_bin.5_k119_6778_3
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Protein Sequence
MNKMKKVIAF AACATMVATL SGCTSSSAKY TKVGFGMTIT PGDKTSTTTA TVALDSKGKV 60 AFIDIDAFQT PNKKDETKTK KELQADYGMK DASAIKKEWF EQAEEFEKWA TGKTLEEIAG 120 VETMDFHGGK AANTGTDLAA GCTIVLDDIL AAIEEAGKNM TEVKADKVGA GEISSYNEEK 180 GQKNTTTAAV ALDSKGKVVW SFVDVSQNPN GKDESKSKKE LQADYGMKDA SAIKKEWFEQ 240 AEEFEKWANG KTADEIAGVE TMDFHGGKAA KTGTDLAAGC TIVIDDFLGA YAEAIANAK 299
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7S7J2K2 | CBM50 | 1 | 299 | 51 | 350 | 0.4365 |
0.481 |
| L0FD45 | CBM50 | 5 | 299 | 46 | 330 | 0.4314 |
0.4855 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.