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Cluster: VatanenT_2016_SRR4305227_bin.9_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme VatanenT_2016_SRR4305227_bin.9_k119_15759 VatanenT_2016_SRR4305227_bin.9_k119_15759_28 32586 33398 - CE1
CAZyme VatanenT_2016_SRR4305227_bin.9_k119_15759 VatanenT_2016_SRR4305227_bin.9_k119_15759_29 33410 34228 - CE1
STP VatanenT_2016_SRR4305227_bin.9_k119_15759 VatanenT_2016_SRR4305227_bin.9_k119_15759_30 34242 35225 - PfkB
NULL(UNKNOWN) VatanenT_2016_SRR4305227_bin.9_k119_15759 VatanenT_2016_SRR4305227_bin.9_k119_15759_31 35240 35944 - NULL(UNKNOWN)
[View Structural Homologs]
TC VatanenT_2016_SRR4305227_bin.9_k119_15759 VatanenT_2016_SRR4305227_bin.9_k119_15759_32 35963 36961 - 3.A.1.2.1
TC VatanenT_2016_SRR4305227_bin.9_k119_15759 VatanenT_2016_SRR4305227_bin.9_k119_15759_33 36984 38471 - 3.A.1.2.20
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15759_28
Type: CAZyme
Location: 32586 - 33398 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15759_29
Type: CAZyme
Location: 33410 - 34228 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15759_30
Type: STP
Location: 34242 - 35225 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15759_31
Type:
Location: 35240 - 35944 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15759_32
Type: TC
Location: 35963 - 36961 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_15759_33
Type: TC
Location: 36984 - 38471 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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