PROTEIN: VatanenT_2016_SRR4305227_bin.9_k119_15759_31
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Protein File & Metadata
Source:
VatanenT_2016_SRR4305227_bin.9_k119_15759_31.pdb
Genome ID:
Protein ID:
VatanenT_2016_SRR4305227_bin.9_k119_15759_31
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Protein Sequence
MIKSTVPGPA LQVPDVSAAE HWLCENLFFK SSPAGDGAVL ENGGCTLYLE PGRETVSVLP 60 PKEGYFTGLS HIALRTGNIE IAIEWCKARN LRMILQDGKS FFNPGIFGSG ELYYNILSPF 120 GVVFEISQRV ADTEWDEPQL ISGLDHLGIP CANIGEELDF LKRIGFVPEF PIVHNCNNEE 180 GRILCDMVSR QGLTLEVYQF IDRTPCPMAE DVPLRGIYGL GMTTRSPGGL QMLE 234
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-I1KNE1-F1-model_v4 | 5 | 234 | 14 | 270 | 0.6993 |
0.7911 |
| AF-O65398-F1-model_v4 | 5 | 234 | 17 | 273 | 0.6928 |
0.7878 |
| AF-I1MFH9-F1-model_v4 | 5 | 234 | 21 | 277 | 0.6891 |
0.788 |
| AF-Q948T6-F1-model_v4 | 5 | 234 | 24 | 281 | 0.6835 |
0.7863 |
| AF-Q0DJT2-F1-model_v4 | 5 | 234 | 28 | 279 | 0.683 |
0.7852 |
| AF-P50107-F1-model_v4 | 5 | 234 | 22 | 319 | 0.6752 |
0.8132 |
| AF-C0NIB9-F1-model_v4 | 5 | 234 | 9 | 307 | 0.6678 |
0.799 |
| AF-A0A175VND2-F1-model_v4 | 5 | 234 | 11 | 308 | 0.6674 |
0.799 |
| AF-U7PY90-F1-model_v4 | 5 | 234 | 13 | 313 | 0.6636 |
0.801 |
| AF-A0A0D2H689-F1-model_v4 | 5 | 234 | 8 | 313 | 0.6598 |
0.794 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6bnx-assembly1.cif.gz_A | 5 | 234 | 15 | 270 | 0.6907 |
0.7834 |
| 5d7z-assembly1.cif.gz_A | 5 | 234 | 10 | 265 | 0.69 |
0.7828 |
| 4huz-assembly1.cif.gz_A-2 | 5 | 234 | 6 | 276 | 0.6503 |
0.7756 |
| 3oaj-assembly1.cif.gz_A | 6 | 234 | 7 | 266 | 0.6463 |
0.7677 |
| 3pkv-assembly1.cif.gz_A | 6 | 234 | 3 | 221 | 0.6425 |
0.6992 |
| 1zsw-assembly1.cif.gz_A | 6 | 234 | 21 | 286 | 0.6309 |
0.7663 |
| 2r5v-assembly1.cif.gz_A | 1 | 205 | 32 | 326 | 0.4566 |
0.6259 |
| 1t47-assembly1.cif.gz_B | 1 | 203 | 36 | 341 | 0.4544 |
0.6358 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q39366-F1-model_v4 | 5 | 234 | 17 | 272 | 0.6815 |
0.7749 |
| AF-P50107-F1-model_v4 | 5 | 234 | 22 | 319 | 0.6752 |
0.8132 |
| AF-O34689-F1-model_v4 | 6 | 234 | 6 | 275 | 0.6644 |
0.7949 |
| AF-O34543-F1-model_v4 | 6 | 234 | 6 | 264 | 0.6499 |
0.7655 |
| AF-Q9WXE6-F1-model_v4 | 5 | 234 | 10 | 279 | 0.6469 |
0.7752 |
| AF-P54721-F1-model_v4 | 6 | 234 | 10 | 283 | 0.645 |
0.7439 |
| AF-P96693-F1-model_v4 | 6 | 234 | 8 | 267 | 0.6437 |
0.7667 |
| AF-Q8W593-F1-model_v4 | 1 | 234 | 1 | 339 | 0.6408 |
0.7808 |
| AF-Q9CPV4-F1-model_v4 | 5 | 234 | 5 | 256 | 0.6143 |
0.7146 |
| AF-Q5I0D1-F1-model_v4 | 5 | 234 | 5 | 256 | 0.6133 |
0.7136 |