dbCAN Logo

Cluster: VatanenT_2016_SRR4305227_bin.9_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme VatanenT_2016_SRR4305227_bin.9_k119_13679 VatanenT_2016_SRR4305227_bin.9_k119_13679_51 47693 48940 + GT1
NULL(UNKNOWN) VatanenT_2016_SRR4305227_bin.9_k119_13679 VatanenT_2016_SRR4305227_bin.9_k119_13679_52 49095 50117 - NULL(UNKNOWN)
[View Structural Homologs]
TC VatanenT_2016_SRR4305227_bin.9_k119_13679 VatanenT_2016_SRR4305227_bin.9_k119_13679_53 50358 51845 - 2.A.50.2.1
TC VatanenT_2016_SRR4305227_bin.9_k119_13679 VatanenT_2016_SRR4305227_bin.9_k119_13679_54 52191 53303 - 9.B.34.1.3
TC VatanenT_2016_SRR4305227_bin.9_k119_13679 VatanenT_2016_SRR4305227_bin.9_k119_13679_55 53266 53862 - 8.A.59.4.1
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_13679_51
Type: CAZyme
Location: 47693 - 48940 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_13679_52
Type:
Location: 49095 - 50117 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_13679_53
Type: TC
Location: 50358 - 51845 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_13679_54
Type: TC
Location: 52191 - 53303 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_13679_55
Type: TC
Location: 53266 - 53862 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List