Cluster: ShaoY_2019_ERR3406283_bin.5_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3406283_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406283_bin.5_k141_25047 | ShaoY_2019_ERR3406283_bin.5_k141_25047_15 | 10969 | 11775 | + | CE4 |
| pfam | ShaoY_2019_ERR3406283_bin.5_k141_25047 | ShaoY_2019_ERR3406283_bin.5_k141_25047_16 | 11787 | 12725 | + | NAGPA |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406283_bin.5_k141_25047 | ShaoY_2019_ERR3406283_bin.5_k141_25047_17 | 12734 | 13675 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3406283_bin.5_k141_25047 | ShaoY_2019_ERR3406283_bin.5_k141_25047_18 | 13846 | 14925 | + | GT9 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406283_bin.5_k141_25047 | ShaoY_2019_ERR3406283_bin.5_k141_25047_19 | 15008 | 15325 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3406283_bin.5_k141_25047 | ShaoY_2019_ERR3406283_bin.5_k141_25047_20 | 15819 | 17171 | + | 3.B.1.1.1 |
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25047_15
Type: CAZyme
Location: 10969 - 11775 (+)
Type: CAZyme
Location: 10969 - 11775 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25047_16
Type: pfam
Location: 11787 - 12725 (+)
Type: pfam
Location: 11787 - 12725 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25047_17
Type:
Location: 12734 - 13675 (+)
Type:
Location: 12734 - 13675 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25047_18
Type: CAZyme
Location: 13846 - 14925 (+)
Type: CAZyme
Location: 13846 - 14925 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25047_19
Type:
Location: 15008 - 15325 (+)
Type:
Location: 15008 - 15325 (+)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_25047_20
Type: TC
Location: 15819 - 17171 (+)
Type: TC
Location: 15819 - 17171 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.