PROTEIN: ShaoY_2019_ERR3406283_bin.5_k141_25047_17
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406283_bin.5_k141_25047_17.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406283_bin.5_k141_25047_17
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Protein Sequence
MKPFTRVLSA FAVGILLQGG VYLYLDQYMF APTTEFNVSG ASKDDTKNFP DVKEGRKYVS 60 YDHQFMAVVT DESLRIYKAG ESKPTTVSLK GRSISYFDWM PDRNYAIMGL YTDNKVVMAR 120 LNADDPEHEV DTELEDVPKG SRIVDAAYSE ATNVVYMKVK VREGAYRIYR TDANYDTRRV 180 YMQATDIGRI AVFYDEDNFF YDNAKTGDIF MFNGIEGGWR VINPPGRFRL LGVDTSKTIY 240 IARVDEDNNV LTVYSGKLGV GFKPIYKYNN PTTLSEVTMN AVKEIIANGS DDTTKVTEDN 300 DKSSKDSSSK KKN 313
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K7M609-F1-model_v4 | 3 | 293 | 3 | 286 | 0.5678 |
0.6634 |
| AF-I1MX41-F1-model_v4 | 1 | 297 | 1 | 328 | 0.5617 |
0.6349 |
| AF-K7MK24-F1-model_v4 | 23 | 293 | 35 | 368 | 0.5348 |
0.6805 |
| AF-Q54WU4-F1-model_v4 | 40 | 297 | 22 | 500 | 0.5101 |
0.7693 |
| AF-A0A077YVU5-F1-model_v4 | 42 | 289 | 11 | 269 | 0.5054 |
0.7159 |
| AF-Q9M1J7-F1-model_v4 | 24 | 298 | 60 | 376 | 0.5015 |
0.6308 |
| AF-Q6Z4U1-F1-model_v4 | 41 | 285 | 48 | 342 | 0.4999 |
0.6781 |
| AF-A0A5S6PQL4-F1-model_v4 | 22 | 291 | 114 | 404 | 0.4944 |
0.6807 |
| AF-Q4V3D9-F1-model_v4 | 41 | 285 | 47 | 359 | 0.4737 |
0.6536 |
| AF-I1KFH2-F1-model_v4 | 41 | 288 | 110 | 441 | 0.4602 |
0.669 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A810E6E5-F1-model_v4 | CBM50 | 23 | 287 | 158 | 472 | 0.4847 |
0.7471 |
| A0A1H8SW06 | CBM50 | 23 | 284 | 158 | 469 | 0.4835 |
0.7531 |
| A0A518G9Z4 | CBM57 | 27 | 313 | 522 | 913 | 0.3744 |
0.6933 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1H8SW06 | CBM50 | 23 | 284 | 158 | 469 | 0.4835 |
0.7531 |
| A0A975GAQ9 | CBM54 | 3 | 312 | 81 | 1357 | 0.422 |
0.7044 |
| A0A518G9Z4 | CBM57 | 27 | 313 | 522 | 913 | 0.3744 |
0.6933 |
| A0A7R8X6P4 | GT58 | 1 | 299 | 293 | 717 | 0.3557 |
0.6543 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5gva-assembly1.cif.gz_A | 27 | 295 | 21 | 305 | 0.6116 |
0.7193 |
| 8wc4-assembly1.cif.gz_B | 27 | 287 | 58 | 334 | 0.5719 |
0.7179 |
| 3mxx-assembly1.cif.gz_A | 28 | 289 | 34 | 315 | 0.5686 |
0.6966 |
| 7t6t-assembly1.cif.gz_B | 28 | 287 | 59 | 336 | 0.5617 |
0.7093 |
| 6m8s-assembly1.cif.gz_D | 28 | 287 | 62 | 333 | 0.5617 |
0.7072 |
| 8f8e-assembly1.cif.gz_A | 42 | 293 | 1 | 254 | 0.5493 |
0.673 |
| 7mqa-assembly1.cif.gz_SG | 6 | 293 | 13 | 336 | 0.5393 |
0.6625 |
| 6zqc-assembly1.cif.gz_CH | 8 | 289 | 8 | 465 | 0.5377 |
0.7168 |
| 4r40-assembly2.cif.gz_C | 1 | 290 | 61 | 389 | 0.5173 |
0.6392 |
| 3jcm-assembly1.cif.gz_B | 42 | 292 | 129 | 394 | 0.5053 |
0.7234 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q66J51-F1-model_v4 | 28 | 302 | 18 | 325 | 0.5784 |
0.6906 |
| AF-B4NW98-F1-model_v4 | 28 | 300 | 14 | 321 | 0.5783 |
0.6911 |
| AF-Q5R7R2-F1-model_v4 | 28 | 302 | 18 | 325 | 0.5781 |
0.6902 |
| AF-Q5IH81-F1-model_v4 | 28 | 305 | 18 | 329 | 0.5743 |
0.6858 |
| AF-P0CS32-F1-model_v4 | 28 | 299 | 18 | 331 | 0.5713 |
0.6997 |
| AF-P0CS33-F1-model_v4 | 28 | 299 | 18 | 330 | 0.5709 |
0.6989 |
| AF-O31507-F1-model_v4 | 37 | 293 | 46 | 321 | 0.5307 |
0.6781 |
| AF-Q2TBP4-F1-model_v4 | 27 | 288 | 27 | 302 | 0.5258 |
0.7113 |
| AF-P0DOB9-F1-model_v4 | 27 | 292 | 89 | 379 | 0.521 |
0.7222 |
| AF-Q8TC44-F1-model_v4 | 27 | 295 | 26 | 351 | 0.5065 |
0.7096 |