Cluster: ShaoY_2019_ERR3406283_bin.5_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406283_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406283_bin.5_k141_7973 | ShaoY_2019_ERR3406283_bin.5_k141_7973_74 | 103167 | 104243 | - | 9.B.124.1.2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406283_bin.5_k141_7973 | ShaoY_2019_ERR3406283_bin.5_k141_7973_75 | 104275 | 105066 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3406283_bin.5_k141_7973 | ShaoY_2019_ERR3406283_bin.5_k141_7973_76 | 105285 | 106058 | - | 3.A.1.16.3 |
| TC | ShaoY_2019_ERR3406283_bin.5_k141_7973 | ShaoY_2019_ERR3406283_bin.5_k141_7973_77 | 106070 | 106822 | - | 3.A.1.17.1 |
| TC | ShaoY_2019_ERR3406283_bin.5_k141_7973 | ShaoY_2019_ERR3406283_bin.5_k141_7973_78 | 106833 | 107786 | - | 3.A.1.17.4 |
| CAZyme | ShaoY_2019_ERR3406283_bin.5_k141_7973 | ShaoY_2019_ERR3406283_bin.5_k141_7973_79 | 108092 | 109729 | - | GT83 |
| TC | ShaoY_2019_ERR3406283_bin.5_k141_7973 | ShaoY_2019_ERR3406283_bin.5_k141_7973_80 | 109740 | 110333 | - | 9.B.27.2.5 |
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7973_74
Type: TC
Location: 103167 - 104243 (-)
Type: TC
Location: 103167 - 104243 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7973_75
Type:
Location: 104275 - 105066 (-)
Type:
Location: 104275 - 105066 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7973_76
Type: TC
Location: 105285 - 106058 (-)
Type: TC
Location: 105285 - 106058 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7973_77
Type: TC
Location: 106070 - 106822 (-)
Type: TC
Location: 106070 - 106822 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7973_78
Type: TC
Location: 106833 - 107786 (-)
Type: TC
Location: 106833 - 107786 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7973_79
Type: CAZyme
Location: 108092 - 109729 (-)
Type: CAZyme
Location: 108092 - 109729 (-)
Gene ID: ShaoY_2019_ERR3406283_bin.5_k141_7973_80
Type: TC
Location: 109740 - 110333 (-)
Type: TC
Location: 109740 - 110333 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.