PROTEIN: ShaoY_2019_ERR3406283_bin.5_k141_7973_75
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406283_bin.5_k141_7973_75.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406283_bin.5_k141_7973_75
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Protein Sequence
MSLFELEKTL SFDQYIATFD RERVAKVHDF VDWLAQYQGG LVHNPWGEVN PDLEIVTDGF 60 DAAQVRRDNL VAYLLPRLGR AKVFVVAEAV GYQGGRFSGI AITCERMLLD KHKTIRAKDV 120 TPIRLERTSS PTSSLLKGTQ QKDGFNEPTD TVVWSAIVEK GIDPYDTLLW NIFPFHPHKD 180 GNSLTNRTPT DKEQQLGWEY TKRLLDLHIE LGGVEPLVLA VGQKSADTMG NFGLSAIGLR 240 HPANGGANLY RQGFAEAIDT YLK 263
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9VEM1-F1-model_v4 | 13 | 263 | 12 | 280 | 0.6465 |
0.7181 |
| AF-Q811Q1-F1-model_v4 | 20 | 263 | 23 | 266 | 0.64 |
0.7272 |
| AF-A0A2R8PW02-F1-model_v4 | 13 | 263 | 1 | 279 | 0.635 |
0.7067 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5h93-assembly3.cif.gz_C | 26 | 263 | 1 | 229 | 0.6748 |
0.7461 |
| 5h93-assembly1.cif.gz_A | 26 | 263 | 1 | 232 | 0.6746 |
0.7413 |
| 5h93-assembly2.cif.gz_B | 25 | 263 | 1 | 231 | 0.6721 |
0.7409 |
| 5h99-assembly1.cif.gz_A | 23 | 263 | 1 | 228 | 0.6694 |
0.7407 |
| 5h93-assembly4.cif.gz_D | 22 | 263 | 1 | 235 | 0.6612 |
0.7271 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q59I47-F1-model_v4 | 20 | 263 | 25 | 268 | 0.6475 |
0.7287 |
| AF-Q811Q1-F1-model_v4 | 20 | 263 | 23 | 266 | 0.64 |
0.7272 |