Cluster: ShaoY_2019_ERR3406219_bin.3_CGC37
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: ShaoY_2019_ERR3406219_bin.3
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406219_bin.3_k141_26387 | ShaoY_2019_ERR3406219_bin.3_k141_26387_10 | 9106 | 14295 | + | GH101 |
| CAZyme | ShaoY_2019_ERR3406219_bin.3_k141_26387 | ShaoY_2019_ERR3406219_bin.3_k141_26387_11 | 14512 | 18810 | - | GH136 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406219_bin.3_k141_26387 | ShaoY_2019_ERR3406219_bin.3_k141_26387_12 | 19182 | 19508 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406219_bin.3_k141_26387 | ShaoY_2019_ERR3406219_bin.3_k141_26387_13 | 19596 | 19841 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3406219_bin.3_k141_26387 | ShaoY_2019_ERR3406219_bin.3_k141_26387_14 | 20252 | 24181 | + | CBM32 | PL8 |
| CAZyme | ShaoY_2019_ERR3406219_bin.3_k141_26387 | ShaoY_2019_ERR3406219_bin.3_k141_26387_15 | 24701 | 28591 | + | CBM32 | PL8 |
| CAZyme | ShaoY_2019_ERR3406219_bin.3_k141_26387 | ShaoY_2019_ERR3406219_bin.3_k141_26387_16 | 29244 | 34457 | + | GH31_18 |
| TC | ShaoY_2019_ERR3406219_bin.3_k141_26387 | ShaoY_2019_ERR3406219_bin.3_k141_26387_17 | 34619 | 35758 | + | 4.A.3.2.4 |
Gene ID: ShaoY_2019_ERR3406219_bin.3_k141_26387_10
Type: CAZyme
Location: 9106 - 14295 (+)
Type: CAZyme
Location: 9106 - 14295 (+)
Gene ID: ShaoY_2019_ERR3406219_bin.3_k141_26387_11
Type: CAZyme
Location: 14512 - 18810 (-)
Type: CAZyme
Location: 14512 - 18810 (-)
Gene ID: ShaoY_2019_ERR3406219_bin.3_k141_26387_12
Type:
Location: 19182 - 19508 (+)
Type:
Location: 19182 - 19508 (+)
Gene ID: ShaoY_2019_ERR3406219_bin.3_k141_26387_13
Type:
Location: 19596 - 19841 (+)
Type:
Location: 19596 - 19841 (+)
Gene ID: ShaoY_2019_ERR3406219_bin.3_k141_26387_14
Type: CAZyme
Location: 20252 - 24181 (+)
Type: CAZyme
Location: 20252 - 24181 (+)
Gene ID: ShaoY_2019_ERR3406219_bin.3_k141_26387_15
Type: CAZyme
Location: 24701 - 28591 (+)
Type: CAZyme
Location: 24701 - 28591 (+)
Gene ID: ShaoY_2019_ERR3406219_bin.3_k141_26387_16
Type: CAZyme
Location: 29244 - 34457 (+)
Type: CAZyme
Location: 29244 - 34457 (+)
Gene ID: ShaoY_2019_ERR3406219_bin.3_k141_26387_17
Type: TC
Location: 34619 - 35758 (+)
Type: TC
Location: 34619 - 35758 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.