Cluster: ShaoY_2019_ERR3406195_bin.12_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406195_bin.12_k141_4308 | ShaoY_2019_ERR3406195_bin.12_k141_4308_1 | 335 | 1213 | + | 3.A.1.103.5 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_4308 | ShaoY_2019_ERR3406195_bin.12_k141_4308_2 | 1232 | 2509 | + | 3.A.1.103.5 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_4308 | ShaoY_2019_ERR3406195_bin.12_k141_4308_3 | 2513 | 3481 | + | GT100 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_4308_1
Type: TC
Location: 335 - 1213 (+)
Type: TC
Location: 335 - 1213 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_4308_2
Type: TC
Location: 1232 - 2509 (+)
Type: TC
Location: 1232 - 2509 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_4308_3
Type: CAZyme
Location: 2513 - 3481 (+)
Type: CAZyme
Location: 2513 - 3481 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.