Cluster: ShaoY_2019_ERR3406195_bin.12_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_14234 | ShaoY_2019_ERR3406195_bin.12_k141_14234_140 | 142857 | 144389 | + | GH77 |
| STP | ShaoY_2019_ERR3406195_bin.12_k141_14234 | ShaoY_2019_ERR3406195_bin.12_k141_14234_141 | 144539 | 145330 | + | GGDEF |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406195_bin.12_k141_14234 | ShaoY_2019_ERR3406195_bin.12_k141_14234_142 | 145400 | 145831 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_14234 | ShaoY_2019_ERR3406195_bin.12_k141_14234_143 | 145882 | 146922 | - | 9.A.23.1.1 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_14234_140
Type: CAZyme
Location: 142857 - 144389 (+)
Type: CAZyme
Location: 142857 - 144389 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_14234_141
Type: STP
Location: 144539 - 145330 (+)
Type: STP
Location: 144539 - 145330 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_14234_142
Type:
Location: 145400 - 145831 (+)
Type:
Location: 145400 - 145831 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_14234_143
Type: TC
Location: 145882 - 146922 (-)
Type: TC
Location: 145882 - 146922 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.