Cluster: ShaoY_2019_ERR3406195_bin.12_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_8908 | ShaoY_2019_ERR3406195_bin.12_k141_8908_5 | 5774 | 7342 | - | GH13_44 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_8908 | ShaoY_2019_ERR3406195_bin.12_k141_8908_6 | 7687 | 9417 | + | 2.A.114.1.3 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_8908 | ShaoY_2019_ERR3406195_bin.12_k141_8908_7 | 9601 | 10497 | + | 3.A.1.3.20 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_8908 | ShaoY_2019_ERR3406195_bin.12_k141_8908_8 | 10569 | 11393 | + | 3.A.1.3.20 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_8908 | ShaoY_2019_ERR3406195_bin.12_k141_8908_9 | 11386 | 12126 | + | 3.A.1.3.20 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8908_5
Type: CAZyme
Location: 5774 - 7342 (-)
Type: CAZyme
Location: 5774 - 7342 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8908_6
Type: TC
Location: 7687 - 9417 (+)
Type: TC
Location: 7687 - 9417 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8908_7
Type: TC
Location: 9601 - 10497 (+)
Type: TC
Location: 9601 - 10497 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8908_8
Type: TC
Location: 10569 - 11393 (+)
Type: TC
Location: 10569 - 11393 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8908_9
Type: TC
Location: 11386 - 12126 (+)
Type: TC
Location: 11386 - 12126 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.