Cluster: ShaoY_2019_ERR3406195_bin.12_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_8206 | ShaoY_2019_ERR3406195_bin.12_k141_8206_58 | 55218 | 56153 | - | GT2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406195_bin.12_k141_8206 | ShaoY_2019_ERR3406195_bin.12_k141_8206_59 | 56177 | 58576 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_8206 | ShaoY_2019_ERR3406195_bin.12_k141_8206_60 | 58635 | 59687 | - | GT4 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_8206 | ShaoY_2019_ERR3406195_bin.12_k141_8206_61 | 59684 | 60838 | - | GT4 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_8206 | ShaoY_2019_ERR3406195_bin.12_k141_8206_62 | 60872 | 62284 | - | 9.B.18.1.1 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8206_58
Type: CAZyme
Location: 55218 - 56153 (-)
Type: CAZyme
Location: 55218 - 56153 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8206_59
Type:
Location: 56177 - 58576 (-)
Type:
Location: 56177 - 58576 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8206_60
Type: CAZyme
Location: 58635 - 59687 (-)
Type: CAZyme
Location: 58635 - 59687 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8206_61
Type: CAZyme
Location: 59684 - 60838 (-)
Type: CAZyme
Location: 59684 - 60838 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8206_62
Type: TC
Location: 60872 - 62284 (-)
Type: TC
Location: 60872 - 62284 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.