Cluster: ShaoY_2019_ERR3406195_bin.12_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406195_bin.12_k141_1083 | ShaoY_2019_ERR3406195_bin.12_k141_1083_26 | 29330 | 30340 | + | 9.B.146.1.6 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_1083 | ShaoY_2019_ERR3406195_bin.12_k141_1083_27 | 30395 | 31675 | + | 2.A.103.1.3 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_1083 | ShaoY_2019_ERR3406195_bin.12_k141_1083_28 | 31706 | 32824 | + | GT28 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_1083_26
Type: TC
Location: 29330 - 30340 (+)
Type: TC
Location: 29330 - 30340 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_1083_27
Type: TC
Location: 30395 - 31675 (+)
Type: TC
Location: 30395 - 31675 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_1083_28
Type: CAZyme
Location: 31706 - 32824 (+)
Type: CAZyme
Location: 31706 - 32824 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.