Cluster: ShaoY_2019_ERR3406169_bin.3_CGC18
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 9
- Substrate:
- Genome ID: ShaoY_2019_ERR3406169_bin.3
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_80 | 71350 | 72900 | - | 2.A.49.5.1 |
| pfam | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_81 | 72923 | 73696 | - | RNase_HII |
| pfam | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_82 | 73683 | 74534 | - | MMR_HSR1 | FeoB_N |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_83 | 74919 | 76028 | - | GT4 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_84 | 76039 | 77589 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_85 | 77590 | 78552 | - | GT32 |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_86 | 78558 | 79553 | - | GT113 |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_87 | 79555 | 80529 | - | GT2 |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_88 | 80543 | 81502 | - | GT2 |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_89 | 81495 | 82505 | - | GT2 |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_90 | 82536 | 83516 | - | GT2 |
| pfam | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_91 | 83531 | 84637 | - | Glyphos_transf |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_92 | 84634 | 85713 | - | GT4 |
| pfam | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_93 | 85715 | 86113 | - | CTP_transf_like |
| CAZyme | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_94 | 86110 | 86943 | - | GT2 |
| pfam | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_95 | 86960 | 88060 | - | EpsG |
| TC | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_96 | 88091 | 88744 | - | 8.A.3.2.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_97 | 88746 | 89450 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3406169_bin.3_k141_1807 | ShaoY_2019_ERR3406169_bin.3_k141_1807_98 | 89493 | 90068 | - | 9.B.18.1.3 |
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_80
Type: TC
Location: 71350 - 72900 (-)
Type: TC
Location: 71350 - 72900 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_81
Type: pfam
Location: 72923 - 73696 (-)
Type: pfam
Location: 72923 - 73696 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_82
Type: pfam
Location: 73683 - 74534 (-)
Type: pfam
Location: 73683 - 74534 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_83
Type: CAZyme
Location: 74919 - 76028 (-)
Type: CAZyme
Location: 74919 - 76028 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_84
Type:
Location: 76039 - 77589 (-)
Type:
Location: 76039 - 77589 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_85
Type: CAZyme
Location: 77590 - 78552 (-)
Type: CAZyme
Location: 77590 - 78552 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_86
Type: CAZyme
Location: 78558 - 79553 (-)
Type: CAZyme
Location: 78558 - 79553 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_87
Type: CAZyme
Location: 79555 - 80529 (-)
Type: CAZyme
Location: 79555 - 80529 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_88
Type: CAZyme
Location: 80543 - 81502 (-)
Type: CAZyme
Location: 80543 - 81502 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_89
Type: CAZyme
Location: 81495 - 82505 (-)
Type: CAZyme
Location: 81495 - 82505 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_90
Type: CAZyme
Location: 82536 - 83516 (-)
Type: CAZyme
Location: 82536 - 83516 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_91
Type: pfam
Location: 83531 - 84637 (-)
Type: pfam
Location: 83531 - 84637 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_92
Type: CAZyme
Location: 84634 - 85713 (-)
Type: CAZyme
Location: 84634 - 85713 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_93
Type: pfam
Location: 85715 - 86113 (-)
Type: pfam
Location: 85715 - 86113 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_94
Type: CAZyme
Location: 86110 - 86943 (-)
Type: CAZyme
Location: 86110 - 86943 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_95
Type: pfam
Location: 86960 - 88060 (-)
Type: pfam
Location: 86960 - 88060 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_96
Type: TC
Location: 88091 - 88744 (-)
Type: TC
Location: 88091 - 88744 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_97
Type:
Location: 88746 - 89450 (-)
Type:
Location: 88746 - 89450 (-)
Gene ID: ShaoY_2019_ERR3406169_bin.3_k141_1807_98
Type: TC
Location: 89493 - 90068 (-)
Type: TC
Location: 89493 - 90068 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.