PROTEIN: ShaoY_2019_ERR3406169_bin.3_k141_1807_84
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406169_bin.3_k141_1807_84.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406169_bin.3_k141_1807_84
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Protein Sequence
MKYTKKSRTE FATLNTSIAL ALQPFQVLLG FINRTIFINL LGVTYLGLNN YLSSLVSILS 60 LAELGVAGAM SYALYGPLDR GEHGKINAFM ILFKKLYRII GFSIFILGAI LSLFLPYMIK 120 DYTVNSEVYL IFFLFVFNSA SSYFFSYKRT LLYVDQRNYV MTLIDFGLNT LRVCLQIGIL 180 FFTQNYIFYL LISIMMNFIG NIIMSGIVDR LYSYLFKNEI TPINQEEKGK FIRNIKGNIV 240 GSIGETIVFQ TDSILMASFV SLAAIGIYGN YTYVLGFISL ILNTMINSVV SSVGNLVHSE 300 STTVADMVKF LKKFQFIAFS LIYFASLGYL MFIHPFMTIW LGESFSFNRT VEILIVLHFF 360 LTFYRRPILT LISVYGLSYE QNKKVIVEIL LNISLSLYFL VILDLGVSGI LLGTICSTVL 420 TCTWYEPYSA FKYGLKASSK DFFKTLLQDF TVAGISFLLL SLLDNYLLTQ LDFIFGLIIK 480 IVLYLIVLGV YVFLFRNHEG GRQIILMIQK VLKLKK 516
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 5 | 516 | 1 | 476 | 0.8314 |
0.8803 |
| AF-Q58467-F1-model_v4 | 6 | 516 | 1 | 507 | 0.8307 |
0.8575 |
| AF-H9L497-F1-model_v4 | 6 | 515 | 1 | 486 | 0.8227 |
0.8695 |
| AF-A0A0H3GSJ3-F1-model_v4 | 6 | 516 | 1 | 478 | 0.8116 |
0.861 |
| AF-P77377-F1-model_v4 | 6 | 515 | 1 | 486 | 0.8113 |
0.8585 |
| AF-Q2FXH6-F1-model_v4 | 6 | 515 | 1 | 549 | 0.7907 |
0.8444 |
| AF-Q5FAD8-F1-model_v4 | 8 | 515 | 1 | 473 | 0.788 |
0.8417 |
| AF-Q2G0R7-F1-model_v4 | 6 | 510 | 4 | 500 | 0.7864 |
0.8279 |
| AF-Q23444-F1-model_v4 | 9 | 516 | 1 | 522 | 0.7828 |
0.8184 |
| AF-P26400-F1-model_v4 | 4 | 438 | 4 | 430 | 0.7818 |
0.8715 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 5 | 516 | 1 | 512 | 0.8141 |
0.8392 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 4 | 511 | 35 | 545 | 0.7662 |
0.818 |
| QNU38870.1 | GT4 | 9 | 516 | 1 | 478 | 0.7106 |
0.8369 |
| QJC17489.1 | GT2 | 1 | 516 | 307 | 846 | 0.6935 |
0.8682 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 7 | 516 | 1 | 589 | 0.6506 |
0.8425 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 4 | 506 | 17 | 513 | 0.6505 |
0.8447 |
| AF-D1BIF1-F1-model_v4 | GT4 | 6 | 516 | 6 | 656 | 0.6501 |
0.8587 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 5 | 516 | 2 | 589 | 0.6436 |
0.8125 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 4 | 516 | 4 | 496 | 0.6416 |
0.8479 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 9 | 516 | 1 | 580 | 0.6409 |
0.8106 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 5 | 516 | 1 | 512 | 0.8141 |
0.8392 |
| A0A160T2N7 | GT28 | 4 | 511 | 35 | 545 | 0.7662 |
0.818 |
| QNU38870.1 | GT4 | 9 | 516 | 1 | 478 | 0.7106 |
0.8369 |
| QJC17489.1 | GT2 | 1 | 516 | 307 | 846 | 0.6935 |
0.8682 |
| A0A3Q9G719 | GT4 | 7 | 516 | 1 | 589 | 0.6506 |
0.8425 |
| F9ZKY1 | GT2 | 4 | 506 | 17 | 513 | 0.6505 |
0.8447 |
| D1BIF1 | GT4 | 6 | 516 | 6 | 656 | 0.6501 |
0.8587 |
| A0A3T0RPT8 | GT4 | 5 | 516 | 2 | 589 | 0.6436 |
0.8125 |
| A0A517Z2I8 | GT2 | 4 | 516 | 4 | 496 | 0.6416 |
0.8479 |
| A0A2U8PPB3 | GT4 | 9 | 516 | 1 | 580 | 0.6409 |
0.8106 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 16 | 504 | 1 | 496 | 0.7804 |
0.8254 |
| 6nc6-assembly2.cif.gz_B | 13 | 502 | 1 | 461 | 0.7653 |
0.8266 |
| 7wag-assembly1.cif.gz_A | 9 | 507 | 1 | 510 | 0.7529 |
0.8021 |
| 6fhz-assembly1.cif.gz_A | 13 | 438 | 9 | 437 | 0.7326 |
0.8317 |
| 5y50-assembly1.cif.gz_A | 9 | 436 | 7 | 437 | 0.6708 |
0.7694 |
| 6hfb-assembly3.cif.gz_C | 3 | 437 | 2 | 448 | 0.6686 |
0.7587 |
| 4mlb-assembly1.cif.gz_C | 3 | 437 | 2 | 449 | 0.6679 |
0.7587 |
| 5xjj-assembly1.cif.gz_A | 12 | 437 | 12 | 439 | 0.667 |
0.7657 |
| 3wbn-assembly1.cif.gz_A | 4 | 437 | 1 | 447 | 0.6555 |
0.7454 |
| 3w4t-assembly1.cif.gz_A | 3 | 437 | 1 | 443 | 0.6509 |
0.7365 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 10 | 516 | 1 | 502 | 0.8582 |
0.8892 |
| AF-Q48457-F1-model_v4 | 6 | 516 | 1 | 485 | 0.8334 |
0.8769 |
| AF-Q58467-F1-model_v4 | 6 | 516 | 1 | 507 | 0.8307 |
0.8575 |
| AF-P77377-F1-model_v4 | 6 | 515 | 1 | 486 | 0.8113 |
0.8585 |
| AF-P33699-F1-model_v4 | 5 | 516 | 3 | 487 | 0.8067 |
0.8582 |
| AF-O34674-F1-model_v4 | 7 | 515 | 1 | 540 | 0.8025 |
0.8514 |
| AF-O32273-F1-model_v4 | 5 | 516 | 1 | 483 | 0.7984 |
0.8453 |
| AF-D4GU68-F1-model_v4 | 8 | 516 | 1 | 472 | 0.7938 |
0.849 |
| AF-Q99191-F1-model_v4 | 4 | 438 | 5 | 432 | 0.7873 |
0.8775 |
| AF-Q05347-F1-model_v4 | 4 | 439 | 1 | 431 | 0.7861 |
0.8755 |