Cluster: ShaoY_2019_ERR3405992_bin.8_CGC50
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- CGC Family ID: CGCFAM_00393
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_30040 | ShaoY_2019_ERR3405992_bin.8_k141_30040_4 | 3627 | 4622 | + | CE4 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_30040 | ShaoY_2019_ERR3405992_bin.8_k141_30040_5 | 5369 | 7090 | - | 3.A.1.106.2 |
| pfam | ShaoY_2019_ERR3405992_bin.8_k141_30040 | ShaoY_2019_ERR3405992_bin.8_k141_30040_6 | 7251 | 8216 | + | Dus |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_30040 | ShaoY_2019_ERR3405992_bin.8_k141_30040_7 | 8304 | 8873 | + | 9.B.105.1.3 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_30040_4
Type: CAZyme
Location: 3627 - 4622 (+)
Type: CAZyme
Location: 3627 - 4622 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_30040_5
Type: TC
Location: 5369 - 7090 (-)
Type: TC
Location: 5369 - 7090 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_30040_6
Type: pfam
Location: 7251 - 8216 (+)
Type: pfam
Location: 7251 - 8216 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_30040_7
Type: TC
Location: 8304 - 8873 (+)
Type: TC
Location: 8304 - 8873 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.