Cluster: ShaoY_2019_ERR3405992_bin.8_CGC49
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405992_bin.8_k141_28457 | ShaoY_2019_ERR3405992_bin.8_k141_28457_31 | 23911 | 25308 | - | 2.A.66.1.34 |
| pfam | ShaoY_2019_ERR3405992_bin.8_k141_28457 | ShaoY_2019_ERR3405992_bin.8_k141_28457_32 | 25614 | 26240 | - | DUF4230 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_28457 | ShaoY_2019_ERR3405992_bin.8_k141_28457_33 | 26337 | 27080 | - | GH78 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_28457_31
Type: TC
Location: 23911 - 25308 (-)
Type: TC
Location: 23911 - 25308 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_28457_32
Type: pfam
Location: 25614 - 26240 (-)
Type: pfam
Location: 25614 - 26240 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_28457_33
Type: CAZyme
Location: 26337 - 27080 (-)
Type: CAZyme
Location: 26337 - 27080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.