Cluster: ShaoY_2019_ERR3405992_bin.8_CGC47
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_26940 | ShaoY_2019_ERR3405992_bin.8_k141_26940_6 | 5675 | 6826 | + | GT28 |
| pfam | ShaoY_2019_ERR3405992_bin.8_k141_26940 | ShaoY_2019_ERR3405992_bin.8_k141_26940_7 | 6856 | 7473 | + | G3P_acyltransf |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_26940 | ShaoY_2019_ERR3405992_bin.8_k141_26940_8 | 7519 | 8154 | - | 2.A.115.2.14 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_26940 | ShaoY_2019_ERR3405992_bin.8_k141_26940_9 | 8374 | 10404 | - | 3.A.1.134.9 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_26940 | ShaoY_2019_ERR3405992_bin.8_k141_26940_10 | 10401 | 11165 | - | 3.A.1.134.4 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_26940_6
Type: CAZyme
Location: 5675 - 6826 (+)
Type: CAZyme
Location: 5675 - 6826 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_26940_7
Type: pfam
Location: 6856 - 7473 (+)
Type: pfam
Location: 6856 - 7473 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_26940_8
Type: TC
Location: 7519 - 8154 (-)
Type: TC
Location: 7519 - 8154 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_26940_9
Type: TC
Location: 8374 - 10404 (-)
Type: TC
Location: 8374 - 10404 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_26940_10
Type: TC
Location: 10401 - 11165 (-)
Type: TC
Location: 10401 - 11165 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.