Cluster: ShaoY_2019_ERR3405992_bin.8_CGC45
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- CGC Family ID: CGCFAM_00206
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_25190 | ShaoY_2019_ERR3405992_bin.8_k141_25190_14 | 11490 | 12905 | + | GH4 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_25190 | ShaoY_2019_ERR3405992_bin.8_k141_25190_15 | 12956 | 15379 | + | GH2 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_25190 | ShaoY_2019_ERR3405992_bin.8_k141_25190_16 | 15576 | 16982 | + | 2.A.2.3.3 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_25190 | ShaoY_2019_ERR3405992_bin.8_k141_25190_17 | 17086 | 17832 | + | CBM67 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_25190_14
Type: CAZyme
Location: 11490 - 12905 (+)
Type: CAZyme
Location: 11490 - 12905 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_25190_15
Type: CAZyme
Location: 12956 - 15379 (+)
Type: CAZyme
Location: 12956 - 15379 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_25190_16
Type: TC
Location: 15576 - 16982 (+)
Type: TC
Location: 15576 - 16982 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_25190_17
Type: CAZyme
Location: 17086 - 17832 (+)
Type: CAZyme
Location: 17086 - 17832 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.