Cluster: ShaoY_2019_ERR3405992_bin.8_CGC41
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405992_bin.8_k141_23201 | ShaoY_2019_ERR3405992_bin.8_k141_23201_1 | 1 | 1050 | - | 9.A.8.1.10 |
| STP | ShaoY_2019_ERR3405992_bin.8_k141_23201 | ShaoY_2019_ERR3405992_bin.8_k141_23201_2 | 1047 | 1274 | - | FeoA |
| peptidase | ShaoY_2019_ERR3405992_bin.8_k141_23201 | ShaoY_2019_ERR3405992_bin.8_k141_23201_3 | 1529 | 2407 | - | G05.UPW |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_23201 | ShaoY_2019_ERR3405992_bin.8_k141_23201_4 | 2409 | 4421 | - | GH42 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_23201 | ShaoY_2019_ERR3405992_bin.8_k141_23201_5 | 4441 | 5394 | - | GH2 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_23201_1
Type: TC
Location: 1 - 1050 (-)
Type: TC
Location: 1 - 1050 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_23201_2
Type: STP
Location: 1047 - 1274 (-)
Type: STP
Location: 1047 - 1274 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_23201_3
Type: peptidase
Location: 1529 - 2407 (-)
Type: peptidase
Location: 1529 - 2407 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_23201_4
Type: CAZyme
Location: 2409 - 4421 (-)
Type: CAZyme
Location: 2409 - 4421 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_23201_5
Type: CAZyme
Location: 4441 - 5394 (-)
Type: CAZyme
Location: 4441 - 5394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.