Cluster: ShaoY_2019_ERR3405992_bin.8_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- CGC Family ID: CGCFAM_00090
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_2466 | ShaoY_2019_ERR3405992_bin.8_k141_2466_4 | 4294 | 5670 | + | GH32 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_2466 | ShaoY_2019_ERR3405992_bin.8_k141_2466_5 | 5657 | 6145 | + | 4.A.1.1.1 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_2466 | ShaoY_2019_ERR3405992_bin.8_k141_2466_6 | 6178 | 7572 | + | 4.A.1.2.9 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_2466 | ShaoY_2019_ERR3405992_bin.8_k141_2466_7 | 7610 | 9793 | + | GH36 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_2466_4
Type: CAZyme
Location: 4294 - 5670 (+)
Type: CAZyme
Location: 4294 - 5670 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_2466_5
Type: TC
Location: 5657 - 6145 (+)
Type: TC
Location: 5657 - 6145 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_2466_6
Type: TC
Location: 6178 - 7572 (+)
Type: TC
Location: 6178 - 7572 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_2466_7
Type: CAZyme
Location: 7610 - 9793 (+)
Type: CAZyme
Location: 7610 - 9793 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.