Cluster: ShaoY_2019_ERR3405992_bin.8_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- CGC Family ID: CGCFAM_00866
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405992_bin.8_k141_20283 | ShaoY_2019_ERR3405992_bin.8_k141_20283_4 | 4699 | 5568 | - | 3.A.1.1.12 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_20283 | ShaoY_2019_ERR3405992_bin.8_k141_20283_5 | 5581 | 6507 | - | 3.A.1.1.36 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_20283 | ShaoY_2019_ERR3405992_bin.8_k141_20283_6 | 6531 | 7859 | - | 3.A.1.1.47 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_20283 | ShaoY_2019_ERR3405992_bin.8_k141_20283_7 | 7895 | 9184 | - | GH29 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_20283 | ShaoY_2019_ERR3405992_bin.8_k141_20283_8 | 9401 | 11125 | + | 8.A.59.2.1 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_20283_4
Type: TC
Location: 4699 - 5568 (-)
Type: TC
Location: 4699 - 5568 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_20283_5
Type: TC
Location: 5581 - 6507 (-)
Type: TC
Location: 5581 - 6507 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_20283_6
Type: TC
Location: 6531 - 7859 (-)
Type: TC
Location: 6531 - 7859 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_20283_7
Type: CAZyme
Location: 7895 - 9184 (-)
Type: CAZyme
Location: 7895 - 9184 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_20283_8
Type: TC
Location: 9401 - 11125 (+)
Type: TC
Location: 9401 - 11125 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.