Cluster: ShaoY_2019_ERR3405992_bin.8_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_19722 | ShaoY_2019_ERR3405992_bin.8_k141_19722_2 | 1021 | 3324 | - | GH106 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_19722 | ShaoY_2019_ERR3405992_bin.8_k141_19722_3 | 3278 | 3949 | - | 9.B.28.1.2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405992_bin.8_k141_19722 | ShaoY_2019_ERR3405992_bin.8_k141_19722_4 | 3946 | 4569 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_19722 | ShaoY_2019_ERR3405992_bin.8_k141_19722_5 | 4648 | 5520 | - | 3.A.1.1.45 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_19722 | ShaoY_2019_ERR3405992_bin.8_k141_19722_6 | 5520 | 6491 | - | 3.A.1.1.42 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_19722_2
Type: CAZyme
Location: 1021 - 3324 (-)
Type: CAZyme
Location: 1021 - 3324 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_19722_3
Type: TC
Location: 3278 - 3949 (-)
Type: TC
Location: 3278 - 3949 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_19722_4
Type:
Location: 3946 - 4569 (-)
Type:
Location: 3946 - 4569 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_19722_5
Type: TC
Location: 4648 - 5520 (-)
Type: TC
Location: 4648 - 5520 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_19722_6
Type: TC
Location: 5520 - 6491 (-)
Type: TC
Location: 5520 - 6491 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.