Cluster: ShaoY_2019_ERR3405992_bin.8_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_17189 | ShaoY_2019_ERR3405992_bin.8_k141_17189_21 | 28798 | 31143 | + | GH39 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_17189 | ShaoY_2019_ERR3405992_bin.8_k141_17189_22 | 31321 | 32685 | + | 2.A.2.3.2 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_17189 | ShaoY_2019_ERR3405992_bin.8_k141_17189_23 | 32687 | 33802 | + | GH179 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_17189_21
Type: CAZyme
Location: 28798 - 31143 (+)
Type: CAZyme
Location: 28798 - 31143 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_17189_22
Type: TC
Location: 31321 - 32685 (+)
Type: TC
Location: 31321 - 32685 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_17189_23
Type: CAZyme
Location: 32687 - 33802 (+)
Type: CAZyme
Location: 32687 - 33802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.