Cluster: ShaoY_2019_ERR3405992_bin.8_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- CGC Family ID: CGCFAM_10585
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_16975 | ShaoY_2019_ERR3405992_bin.8_k141_16975_19 | 15925 | 17943 | + | GH42 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_16975 | ShaoY_2019_ERR3405992_bin.8_k141_16975_20 | 18534 | 20222 | + | 2.A.114.1.3 |
| pfam | ShaoY_2019_ERR3405992_bin.8_k141_16975 | ShaoY_2019_ERR3405992_bin.8_k141_16975_21 | 20347 | 21492 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | ShaoY_2019_ERR3405992_bin.8_k141_16975 | ShaoY_2019_ERR3405992_bin.8_k141_16975_22 | 21520 | 22737 | - | Aminotran_3 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_16975 | ShaoY_2019_ERR3405992_bin.8_k141_16975_23 | 22759 | 23388 | - | 2.A.115.2.14 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_16975 | ShaoY_2019_ERR3405992_bin.8_k141_16975_24 | 23418 | 24158 | - | 3.A.1.3.20 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_16975 | ShaoY_2019_ERR3405992_bin.8_k141_16975_25 | 24201 | 24962 | - | 3.A.1.3.20 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16975_19
Type: CAZyme
Location: 15925 - 17943 (+)
Type: CAZyme
Location: 15925 - 17943 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16975_20
Type: TC
Location: 18534 - 20222 (+)
Type: TC
Location: 18534 - 20222 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16975_21
Type: pfam
Location: 20347 - 21492 (-)
Type: pfam
Location: 20347 - 21492 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16975_22
Type: pfam
Location: 21520 - 22737 (-)
Type: pfam
Location: 21520 - 22737 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16975_23
Type: TC
Location: 22759 - 23388 (-)
Type: TC
Location: 22759 - 23388 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16975_24
Type: TC
Location: 23418 - 24158 (-)
Type: TC
Location: 23418 - 24158 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16975_25
Type: TC
Location: 24201 - 24962 (-)
Type: TC
Location: 24201 - 24962 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.