Cluster: ShaoY_2019_ERR3405992_bin.8_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405992_bin.8_k141_16736 | ShaoY_2019_ERR3405992_bin.8_k141_16736_9 | 11283 | 12185 | + | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_16736 | ShaoY_2019_ERR3405992_bin.8_k141_16736_10 | 12185 | 13006 | + | 3.A.1.1.45 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_16736 | ShaoY_2019_ERR3405992_bin.8_k141_16736_11 | 13028 | 15055 | + | GH151 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16736_9
Type: TC
Location: 11283 - 12185 (+)
Type: TC
Location: 11283 - 12185 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16736_10
Type: TC
Location: 12185 - 13006 (+)
Type: TC
Location: 12185 - 13006 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_16736_11
Type: CAZyme
Location: 13028 - 15055 (+)
Type: CAZyme
Location: 13028 - 15055 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.