dbCAN Logo

Cluster: ShaoY_2019_ERR3405992_bin.8_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405992_bin.8_k141_14471 ShaoY_2019_ERR3405992_bin.8_k141_14471_2 183 2939 + CBM67 | GH78
TC ShaoY_2019_ERR3405992_bin.8_k141_14471 ShaoY_2019_ERR3405992_bin.8_k141_14471_3 3045 4448 + 2.A.2.3.3
CAZyme ShaoY_2019_ERR3405992_bin.8_k141_14471 ShaoY_2019_ERR3405992_bin.8_k141_14471_4 4554 6863 + GH3
pfam ShaoY_2019_ERR3405992_bin.8_k141_14471 ShaoY_2019_ERR3405992_bin.8_k141_14471_5 6890 7228 + Oxidored_FMN
STP ShaoY_2019_ERR3405992_bin.8_k141_14471 ShaoY_2019_ERR3405992_bin.8_k141_14471_6 7228 10347 + Pyr_redox_2
TC ShaoY_2019_ERR3405992_bin.8_k141_14471 ShaoY_2019_ERR3405992_bin.8_k141_14471_7 10537 12576 + 2.A.66.1.32
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14471_2
Type: CAZyme
Location: 183 - 2939 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14471_3
Type: TC
Location: 3045 - 4448 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14471_4
Type: CAZyme
Location: 4554 - 6863 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14471_5
Type: pfam
Location: 6890 - 7228 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14471_6
Type: STP
Location: 7228 - 10347 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14471_7
Type: TC
Location: 10537 - 12576 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List