Cluster: ShaoY_2019_ERR3405992_bin.8_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- CGC Family ID: CGCFAM_00211
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_14024 | ShaoY_2019_ERR3405992_bin.8_k141_14024_26 | 31831 | 33264 | - | GH32 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_14024 | ShaoY_2019_ERR3405992_bin.8_k141_14024_27 | 33357 | 35309 | - | 4.A.1.2.12 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_14024 | ShaoY_2019_ERR3405992_bin.8_k141_14024_28 | 35689 | 37626 | - | 4.A.1.2.12 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_14024 | ShaoY_2019_ERR3405992_bin.8_k141_14024_29 | 37653 | 39317 | - | GH13_31 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14024_26
Type: CAZyme
Location: 31831 - 33264 (-)
Type: CAZyme
Location: 31831 - 33264 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14024_27
Type: TC
Location: 33357 - 35309 (-)
Type: TC
Location: 33357 - 35309 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14024_28
Type: TC
Location: 35689 - 37626 (-)
Type: TC
Location: 35689 - 37626 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_14024_29
Type: CAZyme
Location: 37653 - 39317 (-)
Type: CAZyme
Location: 37653 - 39317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.