Cluster: ShaoY_2019_ERR3405992_bin.8_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- CGC Family ID: CGCFAM_09483
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405992_bin.8_k141_12642 | ShaoY_2019_ERR3405992_bin.8_k141_12642_3 | 1885 | 2763 | + | 3.A.1.1.35 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_12642 | ShaoY_2019_ERR3405992_bin.8_k141_12642_4 | 2763 | 3590 | + | 3.A.1.1.46 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_12642 | ShaoY_2019_ERR3405992_bin.8_k141_12642_5 | 3595 | 4704 | + | GH172 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_12642_3
Type: TC
Location: 1885 - 2763 (+)
Type: TC
Location: 1885 - 2763 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_12642_4
Type: TC
Location: 2763 - 3590 (+)
Type: TC
Location: 2763 - 3590 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_12642_5
Type: CAZyme
Location: 3595 - 4704 (+)
Type: CAZyme
Location: 3595 - 4704 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.