Cluster: ShaoY_2019_ERR3405992_bin.8_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_9553 | ShaoY_2019_ERR3405992_bin.8_k141_9553_2 | 662 | 1696 | + | GT2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405992_bin.8_k141_9553 | ShaoY_2019_ERR3405992_bin.8_k141_9553_3 | 1715 | 2353 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_9553 | ShaoY_2019_ERR3405992_bin.8_k141_9553_4 | 2343 | 3368 | + | 4.D.2.1.5 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_9553 | ShaoY_2019_ERR3405992_bin.8_k141_9553_5 | 3465 | 5273 | + | 3.A.1.120.6 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_9553_2
Type: CAZyme
Location: 662 - 1696 (+)
Type: CAZyme
Location: 662 - 1696 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_9553_3
Type:
Location: 1715 - 2353 (+)
Type:
Location: 1715 - 2353 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_9553_4
Type: TC
Location: 2343 - 3368 (+)
Type: TC
Location: 2343 - 3368 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_9553_5
Type: TC
Location: 3465 - 5273 (+)
Type: TC
Location: 3465 - 5273 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.