Cluster: ShaoY_2019_ERR3405992_bin.8_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- CGC Family ID: CGCFAM_00391
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405992_bin.8_k141_8753 | ShaoY_2019_ERR3405992_bin.8_k141_8753_6 | 3583 | 5322 | + | 3.A.1.135.5 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_8753 | ShaoY_2019_ERR3405992_bin.8_k141_8753_7 | 5345 | 7243 | + | 3.A.1.135.5 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_8753 | ShaoY_2019_ERR3405992_bin.8_k141_8753_8 | 7421 | 9835 | + | GH3 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_8753 | ShaoY_2019_ERR3405992_bin.8_k141_8753_9 | 9835 | 10908 | + | GH43_24 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_8753_6
Type: TC
Location: 3583 - 5322 (+)
Type: TC
Location: 3583 - 5322 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_8753_7
Type: TC
Location: 5345 - 7243 (+)
Type: TC
Location: 5345 - 7243 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_8753_8
Type: CAZyme
Location: 7421 - 9835 (+)
Type: CAZyme
Location: 7421 - 9835 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_8753_9
Type: CAZyme
Location: 9835 - 10908 (+)
Type: CAZyme
Location: 9835 - 10908 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.