Cluster: ShaoY_2019_ERR3405992_bin.8_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_8446 | ShaoY_2019_ERR3405992_bin.8_k141_8446_7 | 6202 | 8196 | - | GH31_1 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_8446 | ShaoY_2019_ERR3405992_bin.8_k141_8446_8 | 8429 | 10156 | + | 3.A.1.135.5 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_8446 | ShaoY_2019_ERR3405992_bin.8_k141_8446_9 | 10156 | 12018 | + | 3.A.1.135.5 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_8446_7
Type: CAZyme
Location: 6202 - 8196 (-)
Type: CAZyme
Location: 6202 - 8196 (-)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_8446_8
Type: TC
Location: 8429 - 10156 (+)
Type: TC
Location: 8429 - 10156 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_8446_9
Type: TC
Location: 10156 - 12018 (+)
Type: TC
Location: 10156 - 12018 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.