Cluster: ShaoY_2019_ERR3405992_bin.8_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405992_bin.8
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405992_bin.8_k141_7481 | ShaoY_2019_ERR3405992_bin.8_k141_7481_9 | 9083 | 10021 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405992_bin.8_k141_7481 | ShaoY_2019_ERR3405992_bin.8_k141_7481_10 | 10037 | 10933 | + | 3.A.1.1.10 |
| STP | ShaoY_2019_ERR3405992_bin.8_k141_7481 | ShaoY_2019_ERR3405992_bin.8_k141_7481_11 | 10948 | 12654 | + | SBP_bac_1 |
| CAZyme | ShaoY_2019_ERR3405992_bin.8_k141_7481 | ShaoY_2019_ERR3405992_bin.8_k141_7481_12 | 12677 | 14161 | + | GH32 |
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_7481_9
Type: TC
Location: 9083 - 10021 (+)
Type: TC
Location: 9083 - 10021 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_7481_10
Type: TC
Location: 10037 - 10933 (+)
Type: TC
Location: 10037 - 10933 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_7481_11
Type: STP
Location: 10948 - 12654 (+)
Type: STP
Location: 10948 - 12654 (+)
Gene ID: ShaoY_2019_ERR3405992_bin.8_k141_7481_12
Type: CAZyme
Location: 12677 - 14161 (+)
Type: CAZyme
Location: 12677 - 14161 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.